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zeb2b zinc finger E-box binding homeobox 2b [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107384681, updated on 12-Sep-2024

Summary

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Gene symbol
zeb2b
Gene description
zinc finger E-box binding homeobox 2b
See related
Ensembl:ENSNFUG00015011080
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
zeb2
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539915.1 (45147206..45233594)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr10 NC_029658.1 (6489808..6581870, complement)

NW_026539915.1Genomic Context describing neighboring genes Neighboring gene activin A receptor type 2Ab Neighboring gene origin recognition complex, subunit 4 Neighboring gene uncharacterized LOC129154616 Neighboring gene kynureninase Neighboring gene aldehyde oxidase 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger E-box-binding homeobox 2b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539915.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    45147206..45233594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054734426.1 → XP_054590401.1  zinc finger E-box-binding homeobox 2b isoform X2

    UniProtKB/TrEMBL
    A0A9D3BES6

  2. XM_015958051.2 → XP_015813537.2  zinc finger E-box-binding homeobox 2b isoform X1

    UniProtKB/TrEMBL
    A0A1A8AF10

  3. XM_015958053.2 → XP_015813539.2  zinc finger E-box-binding homeobox 2b isoform X3

    UniProtKB/TrEMBL
    A0A1A8U466

  4. XM_015958054.2 → XP_015813540.2  zinc finger E-box-binding homeobox 2b isoform X4

    UniProtKB/TrEMBL
    A0A9D3BGG8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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