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LOC107382095 carbohydrate sulfotransferase 8 [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107382095, updated on 16-Nov-2023

Summary

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Gene symbol
LOC107382095
Gene description
carbohydrate sulfotransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
chst8
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539934.1 (61473183..61765695)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr07 NC_029655.1 (62138524..62149760)

NW_026539934.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107393553 Neighboring gene uncharacterized LOC129153267 Neighboring gene uncharacterized LOC107382094 Neighboring gene BTB/POZ domain-containing protein kctd15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539934.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    61473183..61765695
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054732606.1 → XP_054588581.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A1A8ULC0

  2. XM_015954083.2 → XP_015809569.2  carbohydrate sulfotransferase 8 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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