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dscamb Down syndrome cell adhesion molecule b [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107380544, updated on 6-Jun-2024

Summary

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Gene symbol
dscamb
Gene description
Down syndrome cell adhesion molecule b
See related
Ensembl:ENSNFUG00015015815
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
dscam
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539919.1 (31182377..31363381)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr06 NC_029654.1 (37500309..37750469)

NW_026539919.1Genomic Context describing neighboring genes Neighboring gene ATM serine/threonine kinase Neighboring gene beta-secretase 2 Neighboring gene uncharacterized LOC129163848 Neighboring gene uncharacterized LOC129163849 Neighboring gene uncharacterized LOC129163851 Neighboring gene Purkinje cell protein 4b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite self-avoidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: cell adhesion molecule DSCAM
Names
DS cell adhesion molecule

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539919.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    31182377..31363381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015951843.2 → XP_015807329.2  LOW QUALITY PROTEIN: cell adhesion molecule DSCAM

    UniProtKB/TrEMBL
    A0A1A8UPW3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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