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xkr6b XK, Kell blood group complex subunit-related family, member 6b [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107377497, updated on 14-Mar-2024

Summary

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Gene symbol
xkr6b
Gene description
XK, Kell blood group complex subunit-related family, member 6b
See related
Ensembl:ENSNFUG00015024569
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
xkr6
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539925.1 (42412259..42491931, complement)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr04 NC_029652.1 (44907663..44978249, complement)

NW_026539925.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 167 member Ab Neighboring gene CCM2 scaffold protein Neighboring gene uncharacterized LOC107377500 Neighboring gene myotubularin related protein 9 Neighboring gene L-threonine dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic process involved in development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in engulfment of apoptotic cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine exposure on apoptotic cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
XK-related protein 6b
Names
XK related 6
XK, Kell blood group complex subunit-related family, member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539925.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    42412259..42491931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015947131.2 → XP_015802617.1  XK-related protein 6b

    UniProtKB/TrEMBL
    A0A1A8AD95, A0A1A8VHG0
    Related
    ENSNFUP00015052697.1
    Conserved Domains (1) summary
    pfam09815
    Location:85 → 435
    XK-related; XK-related protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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