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USP9X ubiquitin specific peptidase 9 X-linked [ Coturnix japonica (Japanese quail) ]

Gene ID: 107324615, updated on 14-Mar-2024

Summary

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Gene symbol
USP9X
Gene description
ubiquitin specific peptidase 9 X-linked
See related
Ensembl:ENSCJPG00005012674
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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See USP9X in Genome Data Viewer
Location:
chromosome: 1
Exon count:
46
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 1 NC_029516.1 (101016857..101104365, complement)

Chromosome 1 - NC_029516.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107324643 Neighboring gene ribosomal protein L8 Neighboring gene uncharacterized LOC116654420 Neighboring gene mediator complex subunit 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029516.1 Chromosome 1 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ubiquitin carboxyl-terminal hydrolase FAF-X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029516.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    101016857..101104365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015884801.2 → XP_015740287.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2

    UniProtKB/TrEMBL
    A0A8C2U0M9
    Conserved Domains (2) summary
    cd02659
    Location:1550 → 1952
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:1552 → 1947
    UCH; Ubiquitin carboxyl-terminal hydrolase

  2. XM_015884793.2 → XP_015740279.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1

    UniProtKB/TrEMBL
    A0A8C2U0M9
    Conserved Domains (2) summary
    cd02659
    Location:1555 → 1957
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:1557 → 1952
    UCH; Ubiquitin carboxyl-terminal hydrolase

  3. XM_015884807.2 → XP_015740293.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X3

    UniProtKB/TrEMBL
    A0A8C2U3R9
    Conserved Domains (2) summary
    cd02659
    Location:1555 → 1957
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:1557 → 1952
    UCH; Ubiquitin carboxyl-terminal hydrolase

  4. XM_015884815.2 → XP_015740301.1  probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X4

    UniProtKB/TrEMBL
    A0A8C2U3R9
    Related
    ENSCJPP00005020506.1, ENSCJPT00005028283.1
    Conserved Domains (2) summary
    cd02659
    Location:1555 → 1957
    peptidase_C19C; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:1557 → 1952
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
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