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LIME1 Lck interacting transmembrane adaptor 1 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107323146, updated on 14-Mar-2024

Summary

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Gene symbol
LIME1
Gene description
Lck interacting transmembrane adaptor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 20 NC_029535.1 (9391700..9397180)

Chromosome 20 - NC_029535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116654298 Neighboring gene ADP ribosylation factor related protein 1 Neighboring gene zinc finger CCCH-type and G-patch domain containing Neighboring gene SLC2A4 regulator Neighboring gene zinc finger and BTB domain containing 46

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029535.1 Chromosome 20 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in B cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lck-interacting transmembrane adapter 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029535.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    9391700..9397180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015881954.2 → XP_015737440.1  lck-interacting transmembrane adapter 1 isoform X1

    Conserved Domains (1) summary
    pfam15332
    Location:118 → 320
    LIME1; Lck-interacting transmembrane adapter 1

  2. XM_015881955.2 → XP_015737441.1  lck-interacting transmembrane adapter 1 isoform X2

    Conserved Domains (1) summary
    pfam15332
    Location:33 → 235
    LIME1; Lck-interacting transmembrane adapter 1
Nucleotide Protein
Heading Accession and Version

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