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SORCS3 sortilin related VPS10 domain containing receptor 3 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107316108, updated on 14-Mar-2024

Summary

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Gene symbol
SORCS3
Gene description
sortilin related VPS10 domain containing receptor 3
See related
Ensembl:ENSCJPG00005020015
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
27
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 6 NC_029521.1 (21445530..21707363)

Chromosome 6 - NC_029521.1Genomic Context describing neighboring genes Neighboring gene inositol 1,4,5-trisphosphate receptor interacting protein Neighboring gene cilia and flagella associated protein 58 Neighboring gene uncharacterized LOC107316053 Neighboring gene sortilin related VPS10 domain containing receptor 1 Neighboring gene X-prolyl aminopeptidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029521.1 Chromosome 6 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VPS10 domain-containing receptor SorCS3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029521.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    21445530..21707363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015867276.2 → XP_015722762.1  VPS10 domain-containing receptor SorCS3

    UniProtKB/TrEMBL
    A0A8C2UBS2
    Related
    ENSCJPP00005025516.1, ENSCJPT00005034680.1
    Conserved Domains (4) summary
    smart00602
    Location:209 → 807
    VPS10; VPS10 domain
    pfam00801
    Location:821 → 894
    PKD; PKD domain
    pfam12300
    Location:66 → 160
    DUF3628; Protein of unknown function (DUF3628)
    pfam15901
    Location:652 → 807
    Sortilin_C; Sortilin, neurotensin receptor 3, C-terminal
Nucleotide Protein
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