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LOC107314160 NACHT, LRR and PYD domains-containing protein 3 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107314160, updated on 14-Dec-2023

Summary

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Gene symbol
LOC107314160
Gene description
NACHT, LRR and PYD domains-containing protein 3
See related
Ensembl:ENSCJPG00005013519
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Also known as
NLRP3
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Genomic context

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Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 5 NC_029520.1 (583628..595058, complement)

Chromosome 5 - NC_029520.1Genomic Context describing neighboring genes Neighboring gene scavenger receptor cysteine-rich type 1 protein M130-like Neighboring gene aryl hydrocarbon receptor interacting protein Neighboring gene cell cycle exit and neuronal differentiation 1 Neighboring gene glutamine amidotransferase class 1 domain containing 1 Neighboring gene transaldolase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029520.1 Chromosome 5 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NACHT, LRR and PYD domains-containing protein 3
Names
NLR family pyrin domain containing 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029520.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    583628..595058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032444689.1 → XP_032300580.1  NACHT, LRR and PYD domains-containing protein 3

    UniProtKB/TrEMBL
    A0A8C2YCG0
    Related
    ENSCJPP00005016449.1, ENSCJPT00005023128.1
    Conserved Domains (6) summary
    cd08321
    Location:134 → 213
    Pyrin_ASC-like; Pyrin Death Domain found in ASC
    sd00034
    Location:801 → 828
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam05729
    Location:295 → 462
    NACHT; NACHT domain
    pfam17776
    Location:597 → 717
    NLRC4_HD2; NLRC4 helical domain HD2
    pfam17779
    Location:538 → 595
    NOD2_WH; NOD2 winged helix domain
    cl39015
    Location:765 → 1005
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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