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SBSPON somatomedin B and thrombospondin type 1 domain containing [ Coturnix japonica (Japanese quail) ]

Gene ID: 107310274, updated on 14-Mar-2024

Summary

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Gene symbol
SBSPON
Gene description
somatomedin B and thrombospondin type 1 domain containing
See related
Ensembl:ENSCJPG00005011718
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 2 NC_029517.1 (106622970..106632956, complement)

Chromosome 2 - NC_029517.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily A member 1 Neighboring gene potassium voltage-gated channel subfamily B member 2 Neighboring gene telomeric repeat binding factor 1 Neighboring gene ribosomal protein L7 Neighboring gene retinol dehydrogenase 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029517.1 Chromosome 2 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
somatomedin-B and thrombospondin type-1 domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029517.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    106622970..106632956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032442760.1 → XP_032298651.1  somatomedin-B and thrombospondin type-1 domain-containing protein isoform X1

    UniProtKB/TrEMBL
    A0A8C2TI24
    Conserved Domains (2) summary
    pfam01033
    Location:121 → 169
    Somatomedin_B; Somatomedin B domain
    pfam19028
    Location:174 → 220
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_015855771.2 → XP_015711257.1  somatomedin-B and thrombospondin type-1 domain-containing protein isoform X2

    UniProtKB/TrEMBL
    A0A8C2TI24
    Related
    ENSCJPP00005013958.1, ENSCJPT00005019977.1
    Conserved Domains (2) summary
    pfam01033
    Location:107 → 155
    Somatomedin_B; Somatomedin B domain
    pfam19028
    Location:160 → 206
    TSP1_spondin; Spondin-like TSP1 domain

  3. XM_032442761.1 → XP_032298652.1  somatomedin-B and thrombospondin type-1 domain-containing protein isoform X2

    UniProtKB/TrEMBL
    A0A8C2TI24
    Conserved Domains (2) summary
    pfam01033
    Location:107 → 155
    Somatomedin_B; Somatomedin B domain
    pfam19028
    Location:160 → 206
    TSP1_spondin; Spondin-like TSP1 domain
Nucleotide Protein
Heading Accession and Version

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