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PLAG1 PLAG1 zinc finger [ Coturnix japonica (Japanese quail) ]

Gene ID: 107310175, updated on 14-Mar-2024

Summary

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Gene symbol
PLAG1
Gene description
PLAG1 zinc finger
See related
Ensembl:ENSCJPG00005010407
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 2 NC_029517.1 (100583867..100628516, complement)

Chromosome 2 - NC_029517.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U54 Neighboring gene uncharacterized LOC107310163 Neighboring gene ribosomal protein S20 Neighboring gene MOS proto-oncogene, serine/threonine kinase Neighboring gene uncharacterized LOC107310178 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 7 Neighboring gene epidermal retinol dehydrogenase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029517.1 Chromosome 2 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein PLAG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029517.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    100583867..100628516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015855585.2 → XP_015711071.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  2. XM_015855587.2 → XP_015711073.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Related
    ENSCJPP00005012220.1, ENSCJPT00005017735.1
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  3. XM_015855584.2 → XP_015711070.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Related
    ENSCJPP00005012219.1, ENSCJPT00005017734.1
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  4. XM_015855586.2 → XP_015711072.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  5. XM_015855583.2 → XP_015711069.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  6. XM_015855589.2 → XP_015711075.1  zinc finger protein PLAG1 isoform X2

    Conserved Domains (2) summary
    sd00017
    Location:70 → 90
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  7. XM_015855582.2 → XP_015711068.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  8. XM_032442731.1 → XP_032298622.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain

  9. XM_015855588.2 → XP_015711074.1  zinc finger protein PLAG1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2TIM9
    Related
    ENSCJPP00005012221.1, ENSCJPT00005017736.1
    Conserved Domains (3) summary
    COG5189
    Location:58 → 139
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:36 → 56
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:79 → 103
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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