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LRRK1 leucine rich repeat kinase 1 [ Protobothrops mucrosquamatus ]

Gene ID: 107283871, updated on 14-Mar-2024

Summary

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Gene symbol
LRRK1
Gene description
leucine rich repeat kinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Protobothrops mucrosquamatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015386434.1 (583223..630879)

NW_015386434.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene aldehyde dehydrogenase 1 family member A3 Neighboring gene chondroitin sulfate synthase 1 Neighboring gene selenoprotein S

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015386434 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat serine/threonine-protein kinase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.Mucros_1.0 Primary Assembly

Genomic

  1. NW_015386434.1 Reference P.Mucros_1.0 Primary Assembly

    Range
    583223..630879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029283309.1 → XP_029139142.1  leucine-rich repeat serine/threonine-protein kinase 1

    Conserved Domains (6) summary
    COG4886
    Location:114 → 410
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:126 → 148
    LRR_RI; leucine-rich repeat [structural motif]
    sd00045
    Location:2 → 33
    ANK; ANK repeat [structural motif]
    pfam16095
    Location:689 → 900
    COR; C-terminal of Roc, COR, domain
    cl21453
    Location:1093 → 1368
    PKc_like; Protein Kinases, catalytic domain
    cl21455
    Location:484 → 666
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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