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CAVIN1 caveolae associated protein 1 [ Parus major (Great Tit) ]

Gene ID: 107215155, updated on 3-Aug-2024

Summary

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Gene symbol
CAVIN1
Gene description
caveolae associated protein 1
See related
Ensembl:ENSPMJG00000001161
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Also known as
PTRF
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 27
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 27 NC_031796.1 (1734862..1749763, complement)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 27 NC_029296.1 (1734865..1749751, complement)

Chromosome 27 - NC_031796.1Genomic Context describing neighboring genes Neighboring gene signal transducer and activator of transcription 5B Neighboring gene signal transducer and activator of transcription 3 Neighboring gene ATPase H+ transporting V0 subunit a1 Neighboring gene N-acetyl-alpha-glucosaminidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA primary transcript binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in termination of RNA polymerase I transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase I promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in caveola IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caveolae-associated protein 1
Names
polymerase I and transcript release factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031796.1 Reference Parus_major1.1 Primary Assembly

    Range
    1734862..1749763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015651147.3 → XP_015506633.1  caveolae-associated protein 1

    Related
    ENSPMJP00000001407.1, ENSPMJT00000001853.1
    Conserved Domains (1) summary
    pfam15237
    Location:32 → 299
    PTRF_SDPR; PTRF/SDPR family
Nucleotide Protein
Heading Accession and Version

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