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LIMK2 LIM domain kinase 2 [ Parus major (Great Tit) ]

Gene ID: 107211532, updated on 3-Aug-2024

Summary

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Gene symbol
LIMK2
Gene description
LIM domain kinase 2
See related
Ensembl:ENSPMJG00000018014
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 15 NC_031784.1 (10637656..10670150)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 15 NC_029284.1 (10649025..10670150)

Chromosome 15 - NC_031784.1Genomic Context describing neighboring genes Neighboring gene HNF1 homeobox A Neighboring gene chromosome 15 C12orf43 homolog Neighboring gene uncharacterized LOC117245181 Neighboring gene ring finger protein 185 Neighboring gene uncharacterized LOC107211539 Neighboring gene phosphoinositide-3-kinase interacting protein 1 Neighboring gene POZ/BTB and AT hook containing zinc finger 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM domain kinase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031784.1 Reference Parus_major1.1 Primary Assembly

    Range
    10637656..10670150
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033518139.1 → XP_033374030.1  LIM domain kinase 2 isoform X2

    Related
    ENSPMJP00000024686.1, ENSPMJT00000031874.1
    Conserved Domains (3) summary
    cd14222
    Location:259 → 530
    STKc_LIMK2; Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2
    pfam00595
    Location:74 → 158
    PDZ; PDZ domain (Also known as DHR or GLGF)
    cl02475
    Location:1 → 47
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

  2. XM_015643603.2 → XP_015499089.1  LIM domain kinase 2 isoform X1

    Related
    ENSPMJP00000024687.1, ENSPMJT00000031875.1
    Conserved Domains (5) summary
    cd09465
    Location:46 → 104
    LIM2_LIMK2; The second LIM domain of LIMK2 (LIM domain Kinase 2)
    smart00221
    Location:313 → 580
    STYKc; Protein kinase; unclassified specificity
    cd14222
    Location:316 → 587
    STKc_LIMK2; Catalytic domain of the Serine/Threonine Kinase, LIM domain kinase 2
    pfam00595
    Location:131 → 215
    PDZ; PDZ domain (Also known as DHR or GLGF)
    cl02475
    Location:17 → 44
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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