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F5 coagulation factor V [ Parus major (Great Tit) ]

Gene ID: 107200282, updated on 3-Aug-2024

Summary

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Gene symbol
F5
Gene description
coagulation factor V
See related
Ensembl:ENSPMJG00000011037
Gene type
protein coding
RefSeq status
MODEL
Organism
Parus major
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
28
Annotation release Status Assembly Chr Location
102 current Parus_major1.1 (GCF_001522545.3) 1 NC_031768.1 (93146147..93182411)
100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 1 NC_029268.1 (93146147..93182722)

Chromosome 1 - NC_031768.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member A5 Neighboring gene autophagy related 3 Neighboring gene uncharacterized LOC107200325 Neighboring gene uncharacterized LOC117245097 Neighboring gene uncharacterized LOC117245098

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coagulation factor V

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Parus_major1.1 Primary Assembly

Genomic

  1. NC_031768.1 Reference Parus_major1.1 Primary Assembly

    Range
    93146147..93182411
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015618559.2 → XP_015474045.1  coagulation factor V isoform X1

    Related
    ENSPMJP00000014557.1, ENSPMJT00000019063.1
    Conserved Domains (4) summary
    smart00231
    Location:1623 → 1774
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    cd00057
    Location:1782 → 1932
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd14450
    Location:365 → 545
    CuRO_3_FV_like; The third cupredoxin domain of coagulation factor V and similar proteins
    cl19115
    Location:1299 → 1471
    Cupredoxin; Cupredoxin superfamily

  2. XM_033517590.1 → XP_033373481.1  coagulation factor V isoform X3

    Conserved Domains (2) summary
    cd14450
    Location:365 → 545
    CuRO_3_FV_like; The third cupredoxin domain of coagulation factor V and similar proteins
    cl19115
    Location:1299 → 1471
    Cupredoxin; Cupredoxin superfamily

  3. XM_015618568.2 → XP_015474054.1  coagulation factor V isoform X2

    Related
    ENSPMJP00000014544.1, ENSPMJT00000019049.1
    Conserved Domains (4) summary
    smart00231
    Location:1607 → 1758
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
    cd00057
    Location:1766 → 1916
    FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
    cd14450
    Location:349 → 529
    CuRO_3_FV_like; The third cupredoxin domain of coagulation factor V and similar proteins
    cl19115
    Location:1283 → 1455
    Cupredoxin; Cupredoxin superfamily
Nucleotide Protein
Heading Accession and Version

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