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Sh2d3c SH2 domain containing 3C [ Marmota marmota marmota (Alpine marmot) ]

Gene ID: 107152063, updated on 1-Aug-2024

Summary

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Gene symbol
Sh2d3c
Gene description
SH2 domain containing 3C
See related
Ensembl:ENSMMMG00000017212
Gene type
protein coding
RefSeq status
MODEL
Organism
Marmota marmota marmota (sub-species: marmota)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current marMar (GCF_001458135.2) Unplaced Scaffold NW_026000051.1 (4122346..4148860)
100 previous assembly marMar2.1 (GCF_001458135.1) Unplaced Scaffold NW_015351257.1 (4122560..4148860)

NW_026000051.1Genomic Context describing neighboring genes Neighboring gene folylpolyglutamate synthase Neighboring gene cyclin dependent kinase 9 Neighboring gene torsin family 2 member A Neighboring gene tetratricopeptide repeat domain 16 Neighboring gene cilia and flagella associated protein 157 Neighboring gene peptidyl-tRNA hydrolase 1 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH2 domain-containing protein 3C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Marmota marmota marmota Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference marMar

Genomic

  1. NW_026000051.1 Reference marMar

    Range
    4122346..4148860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015497550.2 → XP_015353036.2  SH2 domain-containing protein 3C isoform X1

    UniProtKB/TrEMBL
    A0A8C5ZX76, A0AAJ7B1A6

  2. XM_015497548.2 → XP_015353034.1  SH2 domain-containing protein 3C isoform X2

    UniProtKB/TrEMBL
    A0A8C5ZV79, A0A8C5ZX76
    Related
    ENSMMMP00000019497.1
    Conserved Domains (2) summary
    cd10337
    Location:56 → 179
    SH2_BCAR3; Src homology 2 (SH2) domain in the Breast Cancer Anti-estrogen Resistance protein 3
    cl02485
    Location:426 → 603
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases. Small GTP-binding proteins of the Ras superfamily function as molecular switches in fundamental events such as signal transduction, cytoskeleton dynamics and intracellular trafficking. ...
Nucleotide Protein
Heading Accession and Version

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