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SLITRK6 SLIT and NTRK like family member 6 [ Gekko japonicus ]

Gene ID: 107122768, updated on 14-Mar-2024

Summary

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Gene symbol
SLITRK6
Gene description
SLIT and NTRK like family member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015175457.1 (107374..110046)

NW_015175457.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015175457.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of presynapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SLIT and NTRK-like protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015175457.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    107374..110046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015425903.1 → XP_015281389.1  SLIT and NTRK-like protein 6

    Conserved Domains (5) summary
    sd00031
    Location:212 → 224
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:94 → 115
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:412 → 453
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:389 → 448
    LRR_8; Leucine rich repeat
    cl15307
    Location:518 → 568
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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