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RPH3A rabphilin 3A [ Gekko japonicus ]

Gene ID: 107112140, updated on 14-Mar-2024

Summary

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Gene symbol
RPH3A
Gene description
rabphilin 3A
Gene type
protein coding
RefSeq status
MODEL
Organism
Gekko japonicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Gekkota; Gekkonidae; Gekkoninae; Gekko
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
100 current Gekko_japonicus_V1.1 (GCF_001447785.1) Unplaced Scaffold NW_015167526.1 (1922752..2057513, complement)

NW_015167526.1Genomic Context describing neighboring genes Neighboring gene chemerin chemokine-like receptor 1 Neighboring gene WSC domain containing 2 Neighboring gene protein tyrosine phosphatase non-receptor type 11 Neighboring gene ribosomal protein L6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015167526.1 Unplaced Scaffold Reference Gekko_japonicus_V1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rabphilin-3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gekko japonicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gekko_japonicus_V1.1 Primary Assembly

Genomic

  1. NW_015167526.1 Reference Gekko_japonicus_V1.1 Primary Assembly

    Range
    1922752..2057513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015413214.1 → XP_015268700.1  rabphilin-3A

    Conserved Domains (3) summary
    cd04035
    Location:603 → 726
    C2A_Rabphilin_Doc2; C2 domain first repeat present in Rabphilin and Double C2 domain
    cd08384
    Location:762 → 894
    C2B_Rabphilin_Doc2; C2 domain second repeat present in Rabphilin and Double C2 domain
    cd15762
    Location:288 → 368
    FYVE_RP3A; FYVE-related domain found in rabphilin-3A and similar proteins
Nucleotide Protein
Heading Accession and Version

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