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ubash3b ubiquitin associated and SH3 domain containing B [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107099241, updated on 2-Nov-2023

Summary

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Gene symbol
ubash3b
Gene description
ubiquitin associated and SH3 domain containing B
See related
Ensembl:ENSCVAG00000021641
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015151303.1 (207133..245005, complement)

NW_015151303.1Genomic Context describing neighboring genes Neighboring gene beta-carotene oxygenase 2 Neighboring gene uncharacterized LOC107099245 Neighboring gene F11 receptor, tandem duplicate 1 Neighboring gene forkhead box protein O1-A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015151303.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-associated and SH3 domain-containing protein B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015151303.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    207133..245005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015397295.1 → XP_015252781.1  ubiquitin-associated and SH3 domain-containing protein B

    UniProtKB/TrEMBL
    A0A3Q2EHF0, A0A3Q2GQP3
    Related
    ENSCVAP00000031958.1, ENSCVAT00000027296.1
    Conserved Domains (3) summary
    cd07067
    Location:378 → 614
    HP_PGM_like; Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction
    cd14301
    Location:28 → 65
    UBA_UBS3B; UBA domain found in ubiquitin-associated and SH3 domain-containing protein B (UBS3B) and similar proteins
    cl17036
    Location:245 → 306
    SH3; Src Homology 3 domain superfamily
Nucleotide Protein
Heading Accession and Version

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