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cops2 COP9 signalosome subunit 2 [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107085323, updated on 14-Mar-2024

Summary

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Gene symbol
cops2
Gene description
COP9 signalosome subunit 2
See related
Ensembl:ENSCVAG00000010417
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Orthologs
human zebrafish all
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Genomic context

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See cops2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150575.1 (1258578..1266005, complement)

NW_015150575.1Genomic Context describing neighboring genes Neighboring gene SHC adaptor protein 4 Neighboring gene SECIS binding protein 2-like Neighboring gene DTW domain containing 1 Neighboring gene fibroblast growth factor 7 Neighboring gene NAD(P) transhydrogenase, mitochondrial-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150575.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deneddylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COP9 signalosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
COP9 signalosome complex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150575.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    1258578..1266005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015375588.1 → XP_015231074.1  COP9 signalosome complex subunit 2

    UniProtKB/TrEMBL
    A0A3Q2E041
    Related
    ENSCVAP00000025533.1, ENSCVAT00000001390.1
    Conserved Domains (2) summary
    COG5159
    Location:40 → 441
    RPN6; 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]
    pfam01399
    Location:309 → 410
    PCI; PCI domain
Nucleotide Protein
Heading Accession and Version

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