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arhgap23a Rho GTPase activating protein 23a [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107084798, updated on 14-Mar-2024

Summary

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Gene symbol
arhgap23a
Gene description
Rho GTPase activating protein 23a
See related
Ensembl:ENSCVAG00000012869
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
arhgap23
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150562.1 (269483..347791, complement)

NW_015150562.1Genomic Context describing neighboring genes Neighboring gene phospholipase C, delta 3a Neighboring gene HEXIM P-TEFb complex subunit 1 Neighboring gene LIM and SH3 protein 1 Neighboring gene plexin domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015150562.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 23
Names
Rho GTPase activating protein 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150562.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    269483..347791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015374808.1 → XP_015230294.1  rho GTPase-activating protein 23 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2E3Z1
    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1054 → 1248
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:886 → 1003
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:885 → 999
    PH; PH domain

  2. XM_015374806.1 → XP_015230292.1  rho GTPase-activating protein 23 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2E3Z1
    Related
    ENSCVAP00000010646.1, ENSCVAT00000017414.1
    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1090 → 1284
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:886 → 1003
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:885 → 999
    PH; PH domain

  3. XM_015374811.1 → XP_015230297.1  rho GTPase-activating protein 23 isoform X5

    UniProtKB/TrEMBL
    A0A3Q2CXK7, A0A3Q2E3Z1
    Related
    ENSCVAP00000010661.1, ENSCVAT00000017428.1
    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1035 → 1229
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:831 → 948
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:830 → 944
    PH; PH domain

  4. XM_015374814.1 → XP_015230300.1  rho GTPase-activating protein 23 isoform X8

    UniProtKB/TrEMBL
    A0A3Q2E3Z1
    Conserved Domains (4) summary
    cd00992
    Location:38 → 145
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1016 → 1210
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:812 → 929
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:811 → 925
    PH; PH domain

  5. XM_015374812.1 → XP_015230298.1  rho GTPase-activating protein 23 isoform X6

    UniProtKB/TrEMBL
    A0A3Q2E425
    Conserved Domains (4) summary
    cd00992
    Location:53 → 160
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1031 → 1225
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:827 → 944
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:826 → 940
    PH; PH domain

  6. XM_015374810.1 → XP_015230296.1  rho GTPase-activating protein 23 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2E3Z1
    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1038 → 1232
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:834 → 951
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:833 → 947
    PH; PH domain

  7. XM_015374807.1 → XP_015230293.1  rho GTPase-activating protein 23 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2CXL4, A0A3Q2E3Z1
    Related
    ENSCVAP00000010671.1, ENSCVAT00000029640.1
    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1087 → 1281
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:883 → 1000
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:882 → 996
    PH; PH domain

  8. XM_015374813.1 → XP_015230299.1  rho GTPase-activating protein 23 isoform X7

    UniProtKB/TrEMBL
    A0A3Q2CXJ7
    Conserved Domains (4) summary
    cd00992
    Location:51 → 158
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1029 → 1223
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:825 → 942
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:824 → 938
    PH; PH domain

  9. XM_015374815.1 → XP_015230301.1  rho GTPase-activating protein 23 isoform X9

    UniProtKB/TrEMBL
    A0A3Q2CXJ2, A0A3Q2CXR6
    Related
    ENSCVAP00000010623.1, ENSCVAT00000017382.1
    Conserved Domains (3) summary
    cd04395
    Location:816 → 1010
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:612 → 729
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:611 → 725
    PH; PH domain

  10. XM_015374816.1 → XP_015230302.1  rho GTPase-activating protein 23 isoform X9

    UniProtKB/TrEMBL
    A0A3Q2CXJ2, A0A3Q2CXR6
    Conserved Domains (3) summary
    cd04395
    Location:816 → 1010
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:612 → 729
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:611 → 725
    PH; PH domain

  11. XM_015374817.1 → XP_015230303.1  rho GTPase-activating protein 23 isoform X10

    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1090 → 1284
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:886 → 1003
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:885 → 999
    PH; PH domain

  12. XM_015374818.1 → XP_015230304.1  rho GTPase-activating protein 23 isoform X11

    Conserved Domains (4) summary
    cd00992
    Location:112 → 219
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cd04395
    Location:1090 → 1284
    RhoGAP_ARHGAP21; RhoGAP_ARHGAP21: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP21-like proteins. ArhGAP21 is a multi-domain protein, containing RhoGAP, PH and PDZ domains, and is believed to play a role in the organization of the ...
    cd01253
    Location:886 → 1003
    PH_ARHGAP21-like; ARHGAP21 and related proteins pleckstrin homology (PH) domain
    pfam00169
    Location:885 → 999
    PH; PH domain
Nucleotide Protein
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