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CLDN20 claudin 20 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106986743, updated on 13-Mar-2024

Summary

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Gene symbol
CLDN20
Gene description
claudin 20
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: B2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B2 NC_069385.1 (12360157..12368502, complement)

Chromosome B2 - NC_069385.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128315798 Neighboring gene NADPH oxidase 3 Neighboring gene transcription factor B1, mitochondrial Neighboring gene uncharacterized LOC113598615 Neighboring gene TIAM Rac1 associated GEF 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069385.1 Chromosome B2 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069385.1 Reference VMU_Ajub_asm_v1.0

    Range
    12360157..12368502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027056582.2 → XP_026912383.1  claudin-20

    UniProtKB/TrEMBL
    A0A6J1Z5W2
    Conserved Domains (1) summary
    cl21598
    Location:5 → 181
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_015084934.3 → XP_014940420.2  claudin-20

    UniProtKB/TrEMBL
    A0A6J1Z5W2
    Conserved Domains (1) summary
    cl21598
    Location:5 → 181
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

RNA

  1. XR_008298255.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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