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IRF6 interferon regulatory factor 6 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106981788, updated on 13-Mar-2024

Summary

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Gene symbol
IRF6
Gene description
interferon regulatory factor 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See IRF6 in Genome Data Viewer
Location:
chromosome: E4
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) E4 NC_069395.1 (35537880..35577627, complement)

Chromosome E4 - NC_069395.1Genomic Context describing neighboring genes Neighboring gene hydroxysteroid 11-beta dehydrogenase 1 Neighboring gene TRAF3 interacting protein 3 Neighboring gene chromosome E4 C1orf74 homolog Neighboring gene UTP25 small subunit processome component Neighboring gene synaptotagmin 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069395.1 Chromosome E4 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069395.1 Reference VMU_Ajub_asm_v1.0

    Range
    35537880..35577627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_053209616.1 → XP_053065591.1  interferon regulatory factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A6J2AP55

  2. XM_015079944.3 → XP_014935430.1  interferon regulatory factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A6J2AP55
    Conserved Domains (2) summary
    pfam00605
    Location:9 → 114
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:224 → 407
    IRF-3; Interferon-regulatory factor 3

  3. XM_027074523.2 → XP_026930324.1  interferon regulatory factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A6J2AP55
    Conserved Domains (2) summary
    pfam00605
    Location:9 → 114
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:224 → 407
    IRF-3; Interferon-regulatory factor 3

  4. XM_053209618.1 → XP_053065593.1  interferon regulatory factor 6 isoform X1

    UniProtKB/TrEMBL
    A0A6J2AP55

  5. XM_053209619.1 → XP_053065594.1  interferon regulatory factor 6 isoform X2

Nucleotide Protein
Heading Accession and Version

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