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RIF1 replication timing regulatory factor 1 [ Acinonyx jubatus (cheetah) ]

Gene ID: 106976068, updated on 13-Mar-2024

Summary

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Gene symbol
RIF1
Gene description
replication timing regulatory factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: C1
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) C1 NC_069381.1 (139645490..139716572)

Chromosome C1 - NC_069381.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S28-like Neighboring gene protein phosphatase 1 regulatory subunit 1A-like Neighboring gene nebulin Neighboring gene ADP ribosylation factor like GTPase 5A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069381.1 Chromosome C1 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telomere-associated protein RIF1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069381.1 Reference VMU_Ajub_asm_v1.0

    Range
    139645490..139716572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027055806.2 → XP_026911607.1  telomere-associated protein RIF1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1Z3M0
    Conserved Domains (2) summary
    pfam12231
    Location:25 → 361
    Rif1_N; Rap1-interacting factor 1 N terminal
    cl26761
    Location:1796 → 2149
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  2. XM_027055809.2 → XP_026911610.1  telomere-associated protein RIF1 isoform X3

    UniProtKB/TrEMBL
    A0A6J1Z5R1
    Conserved Domains (2) summary
    pfam12231
    Location:25 → 361
    Rif1_N; Rap1-interacting factor 1 N terminal
    cl26761
    Location:1796 → 2149
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

  3. XM_015073468.3 → XP_014928954.1  telomere-associated protein RIF1 isoform X2

    UniProtKB/TrEMBL
    A0A6I9ZU67
    Conserved Domains (1) summary
    pfam12231
    Location:20 → 361
    Rif1_N; Rap1-interacting factor 1 N terminal

  4. XM_027055808.2 → XP_026911609.1  telomere-associated protein RIF1 isoform X1

    UniProtKB/TrEMBL
    A0A6J1Z3M0
    Conserved Domains (2) summary
    pfam12231
    Location:25 → 361
    Rif1_N; Rap1-interacting factor 1 N terminal
    cl26761
    Location:1796 → 2149
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]

RNA

  1. XR_003418874.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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