U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sall3a spalt-like transcription factor 3a [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106964238, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
sall3a
Gene description
spalt-like transcription factor 3a
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
sall3
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015114260.1 (126268..141788)

NW_015114260.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106964240 Neighboring gene uncharacterized LOC106964239

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015114260.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sal-like protein 3
Names
spalt like transcription factor 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015114260.1 Reference P_latipinna-1.0

    Range
    126268..141788
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015059636.1 → XP_014915122.1  sal-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A3B3ULZ1
    Conserved Domains (3) summary
    sd00017
    Location:767 → 787
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1150 → 1172
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:779 → 804
    zf-H2C2_2; Zinc-finger double domain

  2. XM_015059637.1 → XP_014915123.1  sal-like protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A3B3ULZ1
    Conserved Domains (3) summary
    sd00017
    Location:766 → 786
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1149 → 1171
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:778 → 803
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.