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hnrnpr heterogeneous nuclear ribonucleoprotein R [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106961130, updated on 2-Nov-2023

Summary

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Gene symbol
hnrnpr
Gene description
heterogeneous nuclear ribonucleoprotein R
See related
Ensembl:ENSPLAG00000008657
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113883.1 (97746..106266)

NW_015113883.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor B1a Neighboring gene ATP synthase inhibitory factor subunit 1 Neighboring gene DnaJ (Hsp40) homolog, subfamily C, member 8 Neighboring gene CDC-like kinase 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113883.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein R

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113883.1 Reference P_latipinna-1.0

    Range
    97746..106266
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015054658.1 → XP_014910144.1  heterogeneous nuclear ribonucleoprotein R isoform X2

    UniProtKB/TrEMBL
    A0A3B3U1F5
    Related
    ENSPLAP00000006502.1, ENSPLAT00000006133.1
    Conserved Domains (4) summary
    cd12249
    Location:164 → 242
    RRM1_hnRNPR_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein R (hnRNP R) and similar proteins
    cd12494
    Location:340 → 411
    RRM3_hnRNPR; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein R (hnRNP R)
    TIGR01648
    Location:106 → 610
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cl17169
    Location:244 → 328
    RRM_SF; RNA recognition motif (RRM) superfamily

  2. XM_015054657.1 → XP_014910143.1  heterogeneous nuclear ribonucleoprotein R isoform X1

    UniProtKB/TrEMBL
    A0A3B3VEF4
    Related
    ENSPLAP00000023352.1, ENSPLAT00000006153.1
    Conserved Domains (4) summary
    cd12249
    Location:164 → 242
    RRM1_hnRNPR_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein R (hnRNP R) and similar proteins
    cd12494
    Location:340 → 411
    RRM3_hnRNPR; RNA recognition motif 3 in vertebrate heterogeneous nuclear ribonucleoprotein R (hnRNP R)
    TIGR01648
    Location:106 → 627
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
    cl17169
    Location:244 → 328
    RRM_SF; RNA recognition motif (RRM) superfamily
Nucleotide Protein
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