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si:dkeyp-84f3.5 uncharacterized LOC106951049 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106951049, updated on 13-Mar-2024

Summary

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Gene symbol
si:dkeyp-84f3.5
Gene description
uncharacterized LOC106951049
See related
Ensembl:ENSPLAG00000005936
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
znf221
Orthologs
zebrafish all
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Genomic context

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See si:dkeyp-84f3.5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113053.1 (171664..182858)

NW_015113053.1Genomic Context describing neighboring genes Neighboring gene formyl peptide receptor 1 Neighboring gene chemokine-like receptor 1 Neighboring gene zinc finger protein 1035 Neighboring gene zinc finger protein 425-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113053.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 221

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113053.1 Reference P_latipinna-1.0

    Range
    171664..182858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015038309.1 → XP_014893795.1  zinc finger protein 221 isoform X1

    Conserved Domains (2) summary
    sd00017
    Location:259 → 279
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:502 → 524
    zf-C2H2; Zinc finger, C2H2 type

  2. XM_015038310.1 → XP_014893796.1  zinc finger protein 221 isoform X2

    UniProtKB/TrEMBL
    A0A3B3VAG2
    Related
    ENSPLAP00000021864.1, ENSPLAT00000009896.1
    Conserved Domains (2) summary
    sd00017
    Location:228 → 248
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:471 → 493
    zf-C2H2; Zinc finger, C2H2 type

  3. XM_015038311.1 → XP_014893797.1  zinc finger protein 221 isoform X3

    Conserved Domains (2) summary
    sd00017
    Location:156 → 176
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:399 → 421
    zf-C2H2; Zinc finger, C2H2 type
Nucleotide Protein
Heading Accession and Version

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