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primpol primase and polymerase (DNA-directed) [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106948233, updated on 13-Mar-2024

Summary

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Gene symbol
primpol
Gene description
primase and polymerase (DNA-directed)
See related
Ensembl:ENSPLAG00000013952
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112896.1 (60928..68809)

NW_015112896.1Genomic Context describing neighboring genes Neighboring gene N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) B-like Neighboring gene neuromedin-K receptor-like Neighboring gene uncharacterized LOC106948235 Neighboring gene acyl-CoA synthetase long chain family member 1a Neighboring gene helt bHLH transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112896.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA primase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in error-prone translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in replication fork processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to UV IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed primase/polymerase protein
Names
primase and DNA directed polymerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112896.1 Reference P_latipinna-1.0

    Range
    60928..68809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015033808.1 → XP_014889294.1  DNA-directed primase/polymerase protein isoform X1

    UniProtKB/TrEMBL
    A0A3B3UEA3
    Conserved Domains (1) summary
    pfam03121
    Location:458 → 520
    Herpes_UL52; Herpesviridae UL52/UL70 DNA primase

  2. XM_015033810.1 → XP_014889296.1  DNA-directed primase/polymerase protein isoform X3

    UniProtKB/TrEMBL
    A0A3B3UEA3
    Conserved Domains (1) summary
    pfam03121
    Location:429 → 491
    Herpes_UL52; Herpesviridae UL52/UL70 DNA primase

  3. XM_015033809.1 → XP_014889295.1  DNA-directed primase/polymerase protein isoform X2

    UniProtKB/TrEMBL
    A0A3B3UEA3
    Related
    ENSPLAP00000010937.1, ENSPLAT00000029008.1
    Conserved Domains (1) summary
    pfam03121
    Location:431 → 493
    Herpes_UL52; Herpesviridae UL52/UL70 DNA primase

  4. XM_015033812.1 → XP_014889298.1  DNA-directed primase/polymerase protein isoform X4

    UniProtKB/TrEMBL
    A0A3B3UEA3
    Conserved Domains (1) summary
    pfam03121
    Location:408 → 470
    Herpes_UL52; Herpesviridae UL52/UL70 DNA primase

  5. XM_015033811.1 → XP_014889297.1  DNA-directed primase/polymerase protein isoform X4

    UniProtKB/TrEMBL
    A0A3B3UEA3
    Conserved Domains (1) summary
    pfam03121
    Location:408 → 470
    Herpes_UL52; Herpesviridae UL52/UL70 DNA primase
Nucleotide Protein
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