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spsb1 splA/ryanodine receptor domain and SOCS box containing 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106946568, updated on 2-Nov-2023

Summary

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Gene symbol
spsb1
Gene description
splA/ryanodine receptor domain and SOCS box containing 1
See related
Ensembl:ENSPLAG00000002997
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112812.1 (459310..463597, complement)

NW_015112812.1Genomic Context describing neighboring genes Neighboring gene emerin-like Neighboring gene uncharacterized LOC106946557 Neighboring gene solute carrier family 25 member 33

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112812.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SPRY domain-containing SOCS box protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112812.1 Reference P_latipinna-1.0

    Range
    459310..463597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015030979.1 → XP_014886465.1  SPRY domain-containing SOCS box protein 1

    UniProtKB/TrEMBL
    A0A3B3TMM3
    Related
    ENSPLAP00000001858.1, ENSPLAT00000014041.1
    Conserved Domains (2) summary
    cd03718
    Location:232 → 273
    SOCS_SSB1_4; SOCS (suppressors of cytokine signaling) box of SSB1 and SSB4 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB1 and SSB4 has been shown to bind to MET, the receptor ...
    cd12906
    Location:54 → 227
    SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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