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rbmx RNA binding motif protein X-linked [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106945740, updated on 13-Mar-2024

Summary

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Gene symbol
rbmx
Gene description
RNA binding motif protein X-linked
See related
Ensembl:ENSPLAG00000010472
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112775.1 (398669..405364)

NW_015112775.1Genomic Context describing neighboring genes Neighboring gene zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) Neighboring gene G protein-coupled receptor 101 Neighboring gene transmembrane 9 superfamily protein member 5 Neighboring gene Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 Neighboring gene sodium/potassium-transporting ATPase subunit beta-233-like Neighboring gene sodium/potassium-transporting ATPase subunit beta-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112775.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding motif protein, X chromosome

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112775.1 Reference P_latipinna-1.0

    Range
    398669..405364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015029637.1 → XP_014885123.1  RNA-binding motif protein, X chromosome

    UniProtKB/TrEMBL
    A0A3B3U547
    Related
    ENSPLAP00000008003.1, ENSPLAT00000003622.1
    Conserved Domains (2) summary
    cd12382
    Location:7 → 86
    RRM_RBMX_like; RNA recognition motif in heterogeneous nuclear ribonucleoprotein G (hnRNP G), Y chromosome RNA recognition motif 1 (hRBMY), testis-specific heterogeneous nuclear ribonucleoprotein G-T (hnRNP G-T) and similar proteins
    pfam08081
    Location:164 → 205
    RBM1CTR; RBM1CTR (NUC064) family

RNA

  1. XR_001424630.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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