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slc8b1 solute carrier family 8 member B1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106944575, updated on 13-Mar-2024

Summary

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Gene symbol
slc8b1
Gene description
solute carrier family 8 member B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112720.1 (538178..546523)

NW_015112720.1Genomic Context describing neighboring genes Neighboring gene MORC family CW-type zinc finger 2 Neighboring gene acyl-CoA dehydrogenase family member 11-like Neighboring gene two pore segment channel 1 Neighboring gene IQ motif containing D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112720.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium:sodium antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium export from the mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/potassium/calcium exchanger 6, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112720.1 Reference P_latipinna-1.0

    Range
    538178..546523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015027640.1 → XP_014883126.1  sodium/potassium/calcium exchanger 6, mitochondrial isoform X1

    Conserved Domains (2) summary
    COG0530
    Location:117 → 577
    ECM27; Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
    pfam01699
    Location:428 → 580
    Na_Ca_ex; Sodium/calcium exchanger protein

  2. XM_015027641.1 → XP_014883127.1  sodium/potassium/calcium exchanger 6, mitochondrial isoform X2

    Conserved Domains (2) summary
    COG0530
    Location:117 → 576
    ECM27; Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
    pfam01699
    Location:427 → 579
    Na_Ca_ex; Sodium/calcium exchanger protein
Nucleotide Protein
Heading Accession and Version

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