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eomesb eomesodermin homolog b [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106935549, updated on 13-Mar-2024

Summary

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Gene symbol
eomesb
Gene description
eomesodermin homolog b
See related
Ensembl:ENSPLAG00000015354
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
eomes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015114594.1 (103538..109120)

NW_015114594.1Genomic Context describing neighboring genes Neighboring gene 5-azacytidine induced 2 Neighboring gene C-x(9)-C motif containing 1 Neighboring gene ankyrin repeat and IBR domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015114594.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CD8-positive, alpha-beta T cell differentiation involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endodermal cell fate specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mesoderm formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eomesodermin homolog
Names
eomesodermin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015114594.1 Reference P_latipinna-1.0

    Range
    103538..109120
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015016066.1 → XP_014871552.1  eomesodermin homolog isoform X2

    Conserved Domains (2) summary
    cd00182
    Location:112 → 305
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
    pfam16176
    Location:327 → 562
    T-box_assoc; T-box transcription factor-associated

  2. XM_015016065.1 → XP_014871551.1  eomesodermin homolog isoform X1

    UniProtKB/TrEMBL
    A0A3B3VPW7
    Related
    ENSPLAP00000027063.1, ENSPLAT00000029444.1
    Conserved Domains (2) summary
    cd00182
    Location:148 → 341
    TBOX; T-box DNA binding domain of the T-box family of transcriptional regulators. The T-box family is an ancient group that appears to play a critical role in development in all animal species. These genes were uncovered on the basis of similarity to the DNA ...
    pfam16176
    Location:363 → 598
    T-box_assoc; T-box transcription factor-associated
Nucleotide Protein
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