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grik5 glutamate ionotropic receptor kainate type subunit 5 [ Poecilia mexicana ]

Gene ID: 106929400, updated on 2-Nov-2023

Summary

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Gene symbol
grik5
Gene description
glutamate ionotropic receptor kainate type subunit 5
See related
Ensembl:ENSPMEG00000013073
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015095633.1 (38762..124259, complement)

NW_015095633.1Genomic Context describing neighboring genes Neighboring gene carcinoembryonic antigen-related cell adhesion molecule 1-like Neighboring gene uncharacterized LOC106929401

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015095633.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables kainate selective glutamate receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of kainate selective glutamate receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate receptor ionotropic, kainate 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015095633.1 Reference P_mexicana-1.0

    Range
    38762..124259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015006329.1 → XP_014861815.1  glutamate receptor ionotropic, kainate 5

    UniProtKB/TrEMBL
    A0A3B3YL81
    Related
    ENSPMEP00000028121.1, ENSPMET00000017977.1
    Conserved Domains (5) summary
    cd06394
    Location:35 → 409
    PBP1_iGluR_Kainate_KA1_2; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the KA1 and KA2 subunits of Kainate receptor
    pfam00060
    Location:555 → 825
    Lig_chan; Ligand-gated ion channel
    pfam01094
    Location:52 → 389
    ANF_receptor; Receptor family ligand binding region
    cl10011
    Location:310 → 380
    Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
    cl21456
    Location:424 → 794
    Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
Nucleotide Protein
Heading Accession and Version

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