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NUP205 nucleoporin 205 [ Calidris pugnax (ruff) ]

Gene ID: 106901211, updated on 3-Aug-2024

Summary

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Gene symbol
NUP205
Gene description
nucleoporin 205
See related
Ensembl:ENSCPUG00000001511
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
44
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015094506.1 (7509749..7560374)

NW_015094506.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 23 member 1-like Neighboring gene CCR4-NOT transcription complex subunit 4 Neighboring gene ADP ribosylation factor like GTPase 1 Neighboring gene UTP20 small subunit processome component

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094506.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear pore inner ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear pore complex protein Nup205

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015094506.1 Reference ASM143184v1

    Range
    7509749..7560374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014963632.1 → XP_014819118.1  nuclear pore complex protein Nup205 isoform X1

    Related
    ENSCPUP00000001966.1, ENSCPUT00000002370.1
    Conserved Domains (1) summary
    pfam11894
    Location:14 → 1686
    Nup192; Nuclear pore complex scaffold, nucleoporins 186/192/205

  2. XM_014963634.1 → XP_014819120.1  nuclear pore complex protein Nup205 isoform X2

    Conserved Domains (1) summary
    pfam11894
    Location:7 → 1662
    Nup192; Nuclear pore complex scaffold, nucleoporins 186/192/205
Nucleotide Protein
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