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SYTL3 synaptotagmin like 3 [ Calidris pugnax (ruff) ]

Gene ID: 106893193, updated on 3-Aug-2024

Summary

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Gene symbol
SYTL3
Gene description
synaptotagmin like 3
See related
Ensembl:ENSCPUG00000014516
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090922.1 (40571459..40618874)

NW_015090922.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 181-like Neighboring gene dynein light chain Tctex-type 1 Neighboring gene ezrin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015090922.1 Unplaced Scaffold Reference ASM143184v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables neurexin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in exocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090922.1 Reference ASM143184v1

    Range
    40571459..40618874
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014950961.1 → XP_014806447.1  synaptotagmin-like protein 3

    Related
    ENSCPUP00000021268.1, ENSCPUT00000025155.1
    Conserved Domains (3) summary
    cd04020
    Location:450 → 610
    C2B_SLP_1-2-3-4; C2 domain second repeat present in Synaptotagmin-like proteins 1-4
    cd15765
    Location:60 → 107
    FYVE_Slp3; FYVE-related domain found in synaptotagmin-like protein 3 (Slp3) and similar proteins
    cl14603
    Location:308 → 435
    C2; C2 domain
Nucleotide Protein
Heading Accession and Version

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