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CRTAC1 cartilage acidic protein 1 [ Sturnus vulgaris (Common starling) ]

Gene ID: 106858977, updated on 3-Aug-2024

Summary

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Gene symbol
CRTAC1
Gene description
cartilage acidic protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650669.1 (942596..956053)

NW_014650669.1Genomic Context describing neighboring genes Neighboring gene lysyl oxidase like 4 Neighboring gene R3H domain and coiled-coil containing 1 like Neighboring gene golgin A7 family member B Neighboring gene secreted frizzled related protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650669.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonal fasciculation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cartilage acidic protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650669.1 Reference Sturnus_vulgaris-1.0

    Range
    942596..956053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014885916.1 → XP_014741402.1  cartilage acidic protein 1

    Conserved Domains (4) summary
    smart00179
    Location:653 → 692
    EGF_CA; Calcium-binding EGF-like domain
    pfam07593
    Location:464 → 516
    UnbV_ASPIC; ASPIC and UnbV
    pfam07645
    Location:563 → 609
    EGF_CA; Calcium-binding EGF domain
    pfam13517
    Location:259 → 313
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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