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TDRKH tudor and KH domain containing [ Equus asinus (ass) ]

Gene ID: 106848354, updated on 13-Mar-2024

Summary

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Gene symbol
TDRKH
Gene description
tudor and KH domain containing
See related
Ensembl:ENSEASG00005005213
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 25 NC_052201.1 (11737712..11753912)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638411.1 (333910..350765, complement)

Chromosome 25 - NC_052201.1Genomic Context describing neighboring genes Neighboring gene RAR related orphan receptor C Neighboring gene leucine rich repeat and Ig domain containing 4 Neighboring gene ornithine decarboxylase antizyme 3 Neighboring gene mitochondrial ribosomal protein L9 Neighboring gene regulatory subunit of type II PKA R-subunit domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tudor and KH domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052201.1 Reference ASM1607732v2

    Range
    11737712..11753912
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044757742.1 → XP_044613677.1  tudor and KH domain-containing protein

    UniProtKB/TrEMBL
    A0A8C4LBA6, A0A8C4LC94
    Related
    ENSEASP00005007085.2, ENSEAST00005007737.2
    Conserved Domains (3) summary
    cd20412
    Location:327 → 419
    Tudor_TDRD2; Tudor domain found in Tudor domain-containing protein 2 (TDRD2) and similar proteins
    cd22428
    Location:49 → 119
    KH-I_TDRKH_rpt1; first type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins
    cd22429
    Location:124 → 205
    KH-I_TDRKH_rpt2; second type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins

  2. XM_044757743.1 → XP_044613678.1  tudor and KH domain-containing protein

    UniProtKB/TrEMBL
    A0A8C4LBA6, A0A8C4LC94
    Conserved Domains (3) summary
    cd20412
    Location:327 → 419
    Tudor_TDRD2; Tudor domain found in Tudor domain-containing protein 2 (TDRD2) and similar proteins
    cd22428
    Location:49 → 119
    KH-I_TDRKH_rpt1; first type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins
    cd22429
    Location:124 → 205
    KH-I_TDRKH_rpt2; second type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins

  3. XM_014868169.2 → XP_014723655.1  tudor and KH domain-containing protein

    UniProtKB/TrEMBL
    A0A8C4LBA6, A0A8C4LC94
    Related
    ENSEASP00005007082.2, ENSEAST00005007734.2
    Conserved Domains (3) summary
    cd20412
    Location:327 → 419
    Tudor_TDRD2; Tudor domain found in Tudor domain-containing protein 2 (TDRD2) and similar proteins
    cd22428
    Location:49 → 119
    KH-I_TDRKH_rpt1; first type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins
    cd22429
    Location:124 → 205
    KH-I_TDRKH_rpt2; second type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins

  4. XM_044757745.1 → XP_044613680.1  tudor and KH domain-containing protein

    UniProtKB/TrEMBL
    A0A8C4LBA6, A0A8C4LC94
    Conserved Domains (3) summary
    cd20412
    Location:327 → 419
    Tudor_TDRD2; Tudor domain found in Tudor domain-containing protein 2 (TDRD2) and similar proteins
    cd22428
    Location:49 → 119
    KH-I_TDRKH_rpt1; first type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins
    cd22429
    Location:124 → 205
    KH-I_TDRKH_rpt2; second type I K homology (KH) RNA-binding domain found in tudor and KH domain-containing protein (TDRKH) and similar proteins
Nucleotide Protein
Heading Accession and Version

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