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SORBS3 sorbin and SH3 domain containing 3 [ Equus asinus (ass) ]

Gene ID: 106847716, updated on 13-Mar-2024

Summary

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Gene symbol
SORBS3
Gene description
sorbin and SH3 domain containing 3
See related
Ensembl:ENSEASG00005018804
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 3 NC_052179.1 (3152223..3184443)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638378.1 (420781..443828, complement)

Chromosome 3 - NC_052179.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123284171 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene protein phosphatase 3 catalytic subunit gamma Neighboring gene uncharacterized LOC123284442 Neighboring gene uncharacterized LOC123284441 Neighboring gene PDZ and LIM domain 2 Neighboring gene chromosome 3 C8orf58 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vinexin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052179.1 Reference ASM1607732v2

    Range
    3152223..3184443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044766806.1 → XP_044622741.1  vinexin isoform X1

    UniProtKB/TrEMBL
    A0A8C4MT32, A0A8C4PSK7
    Conserved Domains (5) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 673
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:671 → 728
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  2. XM_044766805.1 → XP_044622740.1  vinexin isoform X1

    UniProtKB/TrEMBL
    A0A8C4MT32, A0A8C4PSK7
    Conserved Domains (5) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 673
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:671 → 728
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  3. XM_044766809.1 → XP_044622744.1  vinexin isoform X2

    UniProtKB/TrEMBL
    A0A8C4ML10
    Conserved Domains (4) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 680
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  4. XM_044766812.1 → XP_044622747.1  vinexin isoform X5

    UniProtKB/TrEMBL
    A0A8C4ML10
    Conserved Domains (4) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 680
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  5. XM_044766803.1 → XP_044622738.1  vinexin isoform X1

    UniProtKB/TrEMBL
    A0A8C4MT32, A0A8C4PSK7
    Related
    ENSEASP00005027626.2, ENSEAST00005030002.2
    Conserved Domains (5) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 673
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:671 → 728
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  6. XM_044766807.1 → XP_044622742.1  vinexin isoform X1

    UniProtKB/TrEMBL
    A0A8C4MT32, A0A8C4PSK7
    Conserved Domains (5) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 673
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:671 → 728
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  7. XM_044766808.1 → XP_044622743.1  vinexin isoform X1

    UniProtKB/TrEMBL
    A0A8C4MT32, A0A8C4PSK7
    Conserved Domains (5) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:586 → 673
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:671 → 728
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:446 → 500
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:520 → 575
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  8. XM_044766810.1 → XP_044622745.1  vinexin isoform X3

    UniProtKB/TrEMBL
    A0A8C4PSK7
    Conserved Domains (5) summary
    smart00459
    Location:170 → 219
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:577 → 664
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:662 → 719
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:437 → 491
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:511 → 566
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  9. XM_044766811.1 → XP_044622746.1  vinexin isoform X4

    UniProtKB/TrEMBL
    A0A8C4PSK7
    Conserved Domains (5) summary
    smart00459
    Location:155 → 204
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:571 → 658
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:656 → 713
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:431 → 485
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:505 → 560
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

  10. XM_044766813.1 → XP_044622748.1  vinexin isoform X6

    UniProtKB/TrEMBL
    A0A8C4MJS6, A0A8C4PSK7
    Related
    ENSEASP00005027633.2, ENSEAST00005030009.2
    Conserved Domains (5) summary
    smart00459
    Location:116 → 165
    Sorb; Sorbin homologous domain
    PTZ00449
    Location:532 → 619
    PTZ00449; 104 kDa microneme/rhoptry antigen; Provisional
    cd11918
    Location:617 → 674
    SH3_Vinexin_3; Third (or C-terminal) Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11921
    Location:392 → 446
    SH3_Vinexin_1; First Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)
    cd11924
    Location:466 → 521
    SH3_Vinexin_2; Second Src Homology 3 domain of Vinexin, also called Sorbin and SH3 domain containing 3 (Sorbs3)

RNA

  1. XR_006525376.1 RNA Sequence

  2. XR_006525377.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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