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CCDC39 coiled-coil domain 39 molecular ruler complex subunit [ Equus asinus (ass) ]

Gene ID: 106829301, updated on 13-Mar-2024

Summary

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Gene symbol
CCDC39
Gene description
coiled-coil domain 39 molecular ruler complex subunit
See related
Ensembl:ENSEASG00005016830
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 5 NC_052181.1 (71603927..71645622, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637201.1 (1222969..1264649)

Chromosome 5 - NC_052181.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106829303 Neighboring gene uncharacterized LOC123285986 Neighboring gene U6 spliceosomal RNA Neighboring gene tetratricopeptide repeat domain 14 Neighboring gene diphosphoinositol polyphosphate phosphohydrolase 2-like Neighboring gene uncharacterized LOC106829323 Neighboring gene FMR1 autosomal homolog 1 Neighboring gene DnaJ heat shock protein family (Hsp40) member C19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium movement IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium-dependent cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inner dynein arm assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 39
Names
coiled-coil domain containing 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052181.1 Reference ASM1607732v2

    Range
    71603927..71645622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044771130.1 → XP_044627065.1  coiled-coil domain-containing protein 39

    UniProtKB/TrEMBL
    A0A8C4MF61, A0A9L0JDA6
    Related
    ENSEASP00005024744.2, ENSEAST00005026845.2
    Conserved Domains (2) summary
    COG1196
    Location:168 → 855
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    COG4372
    Location:30 → 259
    COG4372; Uncharacterized conserved protein, contains DUF3084 domain [Function unknown]
Nucleotide Protein
Heading Accession and Version

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