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GPSM2 G protein signaling modulator 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 106737091, updated on 8-May-2024

Summary

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Gene symbol
GPSM2
Gene description
G protein signaling modulator 2
Locus tag
Y1Q_0024417
See related
EnsemblRapid:ENSAMIG00015007626
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (68764503..68806565, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714060.1 (1829193..1871092)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 47 Neighboring gene chloride channel CLIC like 1 Neighboring gene COP9 signalosome complex subunit 5-like Neighboring gene AKNA domain containing 1 Neighboring gene syntaxin binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G-protein-signaling modulator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    68764503..68806565 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014602064.3 → XP_014457550.1  G-protein-signaling modulator 2 isoform X2

    UniProtKB/TrEMBL
    A0A151M420
    Conserved Domains (7) summary
    smart00028
    Location:263 → 295
    TPR; Tetratricopeptide repeats
    smart00390
    Location:578 → 600
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    sd00006
    Location:224 → 251
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:224 → 255
    TPR_1; Tetratricopeptide repeat
    pfam02188
    Location:471 → 490
    GoLoco; GoLoco motif
    pfam13176
    Location:305 → 340
    TPR_7; Tetratricopeptide repeat
    pfam13424
    Location:184 → 255
    TPR_12; Tetratricopeptide repeat

  2. XM_006265726.4 → XP_006265788.2  G-protein-signaling modulator 2 isoform X1

    UniProtKB/TrEMBL
    A0A151M420
    Related
    ENSAMIP00015009478.1, ENSAMIT00015013793.1
    Conserved Domains (7) summary
    smart00028
    Location:284 → 316
    TPR; Tetratricopeptide repeats
    smart00390
    Location:599 → 621
    GoLoco; LGN motif, putative GEFs specific for G-alpha GTPases
    sd00006
    Location:245 → 272
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:245 → 276
    TPR_1; Tetratricopeptide repeat
    pfam02188
    Location:492 → 511
    GoLoco; GoLoco motif
    pfam13176
    Location:326 → 361
    TPR_7; Tetratricopeptide repeat
    pfam13424
    Location:205 → 276
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein
Heading Accession and Version

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