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p3h1 prolyl 3-hydroxylase 1 [ Salmo salar (Atlantic salmon) ]

Gene ID: 106565637, updated on 13-Mar-2024

Summary

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Gene symbol
p3h1
Gene description
prolyl 3-hydroxylase 1
See related
Ensembl:ENSSSAG00000040801
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo salar
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: ssa12
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Ssal_v3.1 (GCF_905237065.1) ssa12 NC_059453.1 (68127991..68136326)
100 previous assembly ICSASG_v2 (GCF_000233375.1) ssa12 NC_027311.1 (60314323..60322465)

Chromosome ssa12 - NC_059453.1Genomic Context describing neighboring genes Neighboring gene chromosome ssa12 C1orf50 homolog Neighboring gene uncharacterized LOC106565689 Neighboring gene adaptor related protein complex 5 subunit beta 1 Neighboring gene claudin 19 Neighboring gene eph receptor A8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo salar Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ssal_v3.1

Genomic

  1. NC_059453.1 Reference Ssal_v3.1

    Range
    68127991..68136326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045691676.1 → XP_045547632.1  prolyl 3-hydroxylase 1

    Related
    ENSSSAP00000145355.1, ENSSSAT00000244492.1
Nucleotide Protein
Heading Accession and Version

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