U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

MUC5AC mucin 5AC, oligomeric mucus/gel-forming [ Thamnophis sirtalis ]

Gene ID: 106549563, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
MUC5AC
Gene description
mucin 5AC, oligomeric mucus/gel-forming
Gene type
protein coding
RefSeq status
MODEL
Organism
Thamnophis sirtalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Natricinae; Thamnophis
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See MUC5AC in Genome Data Viewer
Location:
chromosome: Un
Exon count:
48
Annotation release Status Assembly Chr Location
100 current Thamnophis_sirtalis-6.0 (GCF_001077635.1) Unplaced Scaffold NW_013657731.1 (605239..687592, complement)

NW_013657731.1Genomic Context describing neighboring genes Neighboring gene toll interacting protein Neighboring gene mucin-5B-like Neighboring gene uncharacterized LOC106549611 Neighboring gene intestinal mucin-like protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_013657731.1 Unplaced Scaffold Reference Thamnophis_sirtalis-6.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mucin-5AC

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Thamnophis sirtalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Thamnophis_sirtalis-6.0

Genomic

  1. NW_013657731.1 Reference Thamnophis_sirtalis-6.0

    Range
    605239..687592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014067260.1 → XP_013922735.1  mucin-5AC

    UniProtKB/TrEMBL
    A0A6I9YFM3
    Conserved Domains (7) summary
    smart00041
    Location:2759 → 2835
    CT; C-terminal cystine knot-like domain (CTCK)
    smart00216
    Location:2167 → 2335
    VWD; von Willebrand factor (vWF) type D domain
    smart00832
    Location:648 → 728
    C8; This domain contains 8 conserved cysteine residues
    pfam01826
    Location:362 → 418
    TIL; Trypsin Inhibitor like cysteine rich domain
    pfam08742
    Location:286 → 358
    C8; C8 domain
    pfam13330
    Location:1883 → 1972
    Mucin2_WxxW; Mucin-2 protein WxxW repeating region
    cl17735
    Location:888 → 922
    VWC; von Willebrand factor type C domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.