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raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 [ Austrofundulus limnaeus ]

Gene ID: 106529636, updated on 19-Oct-2023

Summary

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Gene symbol
raph1
Gene description
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Austrofundulus limnaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Austrofundulus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current Austrofundulus_limnaeus-1.0 (GCF_001266775.1) Unplaced Scaffold NW_013952859.1 (6890..72172)

NW_013952859.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106529638 Neighboring gene ras-associated and pleckstrin homology domains-containing protein 1-like Neighboring gene GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013952859.1 Unplaced Scaffold Reference Austrofundulus_limnaeus-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-associated and pleckstrin homology domains-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Austrofundulus limnaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Austrofundulus_limnaeus-1.0

Genomic

  1. NW_013952859.1 Reference Austrofundulus_limnaeus-1.0

    Range
    6890..72172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014025115.1 → XP_013880569.1  ras-associated and pleckstrin homology domains-containing protein 1

    UniProtKB/TrEMBL
    A0A2I4CKQ1
    Conserved Domains (3) summary
    cd01259
    Location:486 → 607
    PH_APBB1IP; Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein pleckstrin homology (PH) domain
    pfam00169
    Location:490 → 598
    PH; PH domain
    cl00155
    Location:362 → 443
    UBQ; Ubiquitin-like proteins
Nucleotide Protein
Heading Accession and Version

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