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ATP13A1 ATPase 13A1 [ Apteryx mantelli (North Island brown kiwi) ]

Gene ID: 106500203, updated on 28-Aug-2024

Summary

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Gene symbol
ATP13A1
Gene description
ATPase 13A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 36
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_08 current bAptMan1.hap1 (GCF_036417845.1) 36 NC_090013.1 (165428..180587, complement)

Chromosome 36 - NC_090013.1Genomic Context describing neighboring genes Neighboring gene DSN1 component of MIS12 kinetochore complex Neighboring gene multivesicular body subunit 12A Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 5 Neighboring gene LIM homeobox transcription factor 1-alpha-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_090013.1 Chromosome 36 Reference bAptMan1.hap1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type ion transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables membrane protein dislocase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extraction of mislocalized protein from ER membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoplasmic reticulum transmembrane helix translocase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036417845.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAptMan1.hap1

Genomic

  1. NC_090013.1 Reference bAptMan1.hap1

    Range
    165428..180587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067314699.1 → XP_067170800.1  endoplasmic reticulum transmembrane helix translocase isoform X1

  2. XM_067314700.1 → XP_067170801.1  endoplasmic reticulum transmembrane helix translocase isoform X2

  3. XM_067314701.1 → XP_067170802.1  endoplasmic reticulum transmembrane helix translocase isoform X3

  4. XM_067314702.1 → XP_067170803.1  endoplasmic reticulum transmembrane helix translocase isoform X4

Nucleotide Protein
Heading Accession and Version

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