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RPGRIP1L RPGRIP1 like [ Anser cygnoides (Swan goose) ]

Gene ID: 106045281, updated on 5-Aug-2024

Summary

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Gene symbol
RPGRIP1L
Gene description
RPGRIP1 like
See related
EnsemblRapid:ENSACDG00000013787
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
32
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 12 NC_089884.1 (16372460..16447636)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927740.1 (2011935..2088514)

Chromosome 12 - NC_089884.1Genomic Context describing neighboring genes Neighboring gene FTO alpha-ketoglutarate dependent dioxygenase Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC125184175 Neighboring gene uncharacterized LOC125184176 Neighboring gene uncharacterized LOC136791812 Neighboring gene AKT interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thromboxane A2 receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal rod cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in photoreceptor connecting cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein fantom

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089884.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    16372460..16447636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_067004516.1 → XP_066860617.1  protein fantom isoform X1

  2. XM_048075323.2 → XP_047931280.2  protein fantom isoform X1

  3. XM_067004519.1 → XP_066860620.1  protein fantom isoform X3

  4. XM_067004520.1 → XP_066860621.1  protein fantom isoform X6

  5. XM_067004518.1 → XP_066860619.1  protein fantom isoform X2

  6. XM_048075325.2 → XP_047931282.2  protein fantom isoform X4

  7. XM_048075328.2 → XP_047931285.2  protein fantom isoform X7

  8. XM_067004522.1 → XP_066860623.1  protein fantom isoform X12

  9. XM_048075326.2 → XP_047931283.2  protein fantom isoform X5

  10. XM_067004521.1 → XP_066860622.1  protein fantom isoform X8

  11. XM_048075336.2 → XP_047931293.1  protein fantom isoform X10

  12. XM_048075335.2 → XP_047931292.1  protein fantom isoform X9

  13. XM_048075337.2 → XP_047931294.2  protein fantom isoform X11

  14. XM_067004514.1 → XP_066860615.1  protein fantom isoform X1

  15. XM_067004517.1 → XP_066860618.1  protein fantom isoform X1

RNA

  1. XR_010834602.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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