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SLC6A6 solute carrier family 6 member 6 [ Anser cygnoides (Swan goose) ]

Gene ID: 106045047, updated on 7-Aug-2024

Summary

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Gene symbol
SLC6A6
Gene description
solute carrier family 6 member 6
See related
EnsemblRapid:ENSACDG00000003671
Gene type
protein coding
RefSeq status
MODEL
Organism
Anser cygnoides
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Anser
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_07 current Taihu_goose_T2T_genome (GCF_040182565.1) 10 NC_089882.1 (12475772..12533048, complement)
100 previous assembly GooseV1.0 (GCF_002166845.1) Unplaced Scaffold NW_025927664.1 (10338113..10396253, complement)

Chromosome 10 - NC_089882.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106045075 Neighboring gene coiled-coil domain containing 174 Neighboring gene glutamate receptor interacting protein 2 Neighboring gene uncharacterized LOC106045049 Neighboring gene uncharacterized LOC106045048 Neighboring gene uncharacterized LOC136791596

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables taurine:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in taurine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent taurine transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_040182565.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Taihu_goose_T2T_genome Primary Assembly

Genomic

  1. NC_089882.1 Reference Taihu_goose_T2T_genome Primary Assembly

    Range
    12475772..12533048 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048070304.2 → XP_047926261.1  sodium- and chloride-dependent taurine transporter isoform X4

    UniProtKB/TrEMBL
    A0A8B9IPR6

  2. XM_048070318.2 → XP_047926275.1  sodium- and chloride-dependent taurine transporter isoform X4

    UniProtKB/TrEMBL
    A0A8B9IPR6

  3. XM_048070300.2 → XP_047926257.1  sodium- and chloride-dependent taurine transporter isoform X3

    UniProtKB/TrEMBL
    A0A8B9EN46

  4. XM_048070292.2 → XP_047926249.1  sodium- and chloride-dependent taurine transporter isoform X2

    UniProtKB/TrEMBL
    A0A8B9EL88, A0A8B9EN46

  5. XM_067002998.1 → XP_066859099.1  sodium- and chloride-dependent taurine transporter isoform X1

  6. XM_067003000.1 → XP_066859101.1  sodium- and chloride-dependent taurine transporter isoform X4

Nucleotide Protein
Heading Accession and Version

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