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Arhgap39 Rho GTPase activating protein 39 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105999008, updated on 13-Mar-2024

Summary

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Gene symbol
Arhgap39
Gene description
Rho GTPase activating protein 39
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Arhgap39 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267395.1 (1059796..1101624, complement)

NW_012267395.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 14 Neighboring gene leucine rich repeat containing 24 Neighboring gene zinc finger protein 251 Neighboring gene zinc finger protein 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267395.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267395.1 Reference Dord_2.0

    Range
    1059796..1101624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013033874.1 → XP_012889328.1  rho GTPase-activating protein 39 isoform X2

    UniProtKB/TrEMBL
    A0A1S3GKC4
    Conserved Domains (2) summary
    cd04389
    Location:890 → 1075
    RhoGAP_KIAA1688; RhoGAP_KIAA1688: GTPase-activator protein (GAP) domain for Rho-like GTPases found in KIAA1688-like proteins; KIAA1688 is a protein of unknown function that contains a RhoGAP domain and a myosin tail homology 4 (MyTH4) domain. Small GTPases cluster into ...
    pfam00784
    Location:769 → 878
    MyTH4; MyTH4 domain

  2. XM_013033873.1 → XP_012889327.1  rho GTPase-activating protein 39 isoform X1

    UniProtKB/TrEMBL
    A0A1S3GMW5
    Conserved Domains (2) summary
    cd04389
    Location:921 → 1106
    RhoGAP_KIAA1688; RhoGAP_KIAA1688: GTPase-activator protein (GAP) domain for Rho-like GTPases found in KIAA1688-like proteins; KIAA1688 is a protein of unknown function that contains a RhoGAP domain and a myosin tail homology 4 (MyTH4) domain. Small GTPases cluster into ...
    cl02480
    Location:724 → 909
    MyTH4; MyTH4 domain
Nucleotide Protein
Heading Accession and Version

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