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Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105996864, updated on 13-Mar-2024

Summary

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Gene symbol
Spsb1
Gene description
splA/ryanodine receptor domain and SOCS box containing 1
See related
Ensembl:ENSDORG00000007229
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267222.1 (5508596..5514249)

NW_012267222.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 157 Neighboring gene hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase Neighboring gene solute carrier family 25 member 33 Neighboring gene transmembrane protein 201

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267222.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SPRY domain-containing SOCS box protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267222.1 Reference Dord_2.0

    Range
    5508596..5514249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013031109.1 → XP_012886563.1  SPRY domain-containing SOCS box protein 1

    UniProtKB/TrEMBL
    A0A1S3GCJ8
    Related
    ENSDORP00000006777.1, ENSDORT00000007229.2
    Conserved Domains (2) summary
    cd12906
    Location:54 → 227
    SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)
    cl02533
    Location:232 → 273
    SOCS; SOCS (suppressors of cytokine signaling) box. The SOCS box is found in the C-terminal region of CIS/SOCS family proteins (in combination with a SH2 domain), ASBs (ankyrin repeat-containing proteins with a SOCS box), SSBs (SPRY domain-containing proteins ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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