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Kmt2a lysine methyltransferase 2A [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105980771, updated on 13-Mar-2024

Summary

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Gene symbol
Kmt2a
Gene description
lysine methyltransferase 2A
See related
Ensembl:ENSDORG00000007239
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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See Kmt2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267226.1 (20325990..20374180)

NW_012267226.1Genomic Context describing neighboring genes Neighboring gene ubiquitination factor E4A Neighboring gene ATP synthase membrane subunit g Neighboring gene tetratricopeptide repeat domain 36 Neighboring gene transmembrane protein 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267226.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone H3K4 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase 2A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267226.1 Reference Dord_2.0

    Range
    20325990..20374180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013009681.1 → XP_012865135.1  histone-lysine N-methyltransferase 2A

    UniProtKB/TrEMBL
    A0A1S3EMG3
    Related
    ENSDORP00000006787.2, ENSDORT00000007241.2
    Conserved Domains (11) summary
    cd05493
    Location:1385 → 1515
    Bromo_ALL-1; Bromodomain, ALL-1 like proteins. ALL-1 is a vertebrate homologue of Drosophila trithorax and is often affected in chromosomal rearrangements that are linked to acute leukemias, such as acute lymphocytic leukemia (ALL). Bromodomains are found in many ...
    smart00542
    Location:3398 → 3481
    FYRC; FY-rich domain, C-terminal region
    smart00317
    Location:3560 → 3680
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    smart00508
    Location:3682 → 3698
    PostSET; Cysteine-rich motif following a subset of SET domains
    COG2940
    Location:3546 → 3698
    SET; SET domain-containing protein (function unknown) [General function prediction only]
    pfam02008
    Location:886 → 933
    zf-CXXC; CXXC zinc finger domain
    cd15588
    Location:1172 → 1218
    PHD1_KMT2A; PHD finger 1 found in histone-lysine N-methyltransferase 2A (KMT2A)
    cd15590
    Location:1220 → 1268
    PHD2_KMT2A; PHD finger 2 found in histone-lysine N-methyltransferase 2A (KMT2A)
    cd15592
    Location:1306 → 1362
    PHD3_KMT2A; PHD finger 3 found in histone-lysine N-methyltransferase 2A (KMT2A)
    cd15693
    Location:1609 → 1721
    ePHD_KMT2A; Extended PHD finger found in histone-lysine N-methyltransferase 2A (KMT2A)
    pfam05964
    Location:1763 → 1809
    FYRN; F/Y-rich N-terminus
Nucleotide Protein
Heading Accession and Version

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