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LOC105959573 auxin response factor 5-like [ Erythranthe guttata (spotted monkey flower) ]

Gene ID: 105959573, updated on 22-Oct-2023

Summary

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Gene symbol
LOC105959573
Gene description
auxin response factor 5-like
Locus tag
MIMGU_mgv1a001550mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Erythranthe guttata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Mimgu1_0 (GCF_000504015.1) Unplaced Scaffold NW_012193250.1 (4221227..4225998, complement)

NW_012193250.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105959571 Neighboring gene uncharacterized LOC105959572 Neighboring gene auxin-induced protein 6B-like Neighboring gene filament-like plant protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012193250.1 Unplaced Scaffold Reference Mimgu1_0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hormone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
auxin response factor 5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Erythranthe guttata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mimgu1_0 Primary Assembly

Genomic

  1. NW_012193250.1 Reference Mimgu1_0 Primary Assembly

    Range
    4221227..4225998 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012983713.1 → XP_012839167.1  auxin response factor 5-like

    See identical proteins and their annotated locations for XP_012839167.1

    UniProtKB/TrEMBL
    A0A022R9T6
    Conserved Domains (3) summary
    pfam02309
    Location:710 → 781
    AUX_IAA; AUX/IAA family
    pfam02362
    Location:142 → 244
    B3; B3 DNA binding domain
    pfam06507
    Location:274 → 351
    Auxin_resp; Auxin response factor
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases