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ift74 intraflagellar transport 74 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 105932152, updated on 20-Aug-2024

Summary

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Gene symbol
ift74
Gene description
intraflagellar transport 74
See related
EnsemblRapid:ENSFHEG00000008987
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
Orthologs
human zebrafish all
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Genomic context

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See ift74 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
21
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 21 NC_046381.1 (27637510..27650145, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234354.1 (151244..164367, complement)

Chromosome 21 - NC_046381.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(XXI) chain Neighboring gene C-C chemokine receptor type 3-like Neighboring gene zinc finger, CCHC domain containing 2 Neighboring gene leucine-rich repeat-containing protein 19 Neighboring gene uncharacterized LOC118556924 Neighboring gene microtubule-associated protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport involved in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
intraflagellar transport protein 74 homolog
Names
Intraflagellar transport protein 74

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046381.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    27637510..27650145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036125553.1 → XP_035981446.1  intraflagellar transport protein 74 homolog isoform X2

    UniProtKB/TrEMBL
    A0A3Q2P6M3
    Conserved Domains (2) summary
    PHA03378
    Location:2 → 91
    PHA03378; EBNA-3B; Provisional
    COG1196
    Location:134 → 507
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

  2. XM_012871170.3 → XP_012726624.2  intraflagellar transport protein 74 homolog isoform X1

    UniProtKB/TrEMBL
    A0A3Q2P6M3
    Related
    ENSFHEP00000007842.2, ENSFHET00000003147.2
    Conserved Domains (3) summary
    PHA03378
    Location:2 → 91
    PHA03378; EBNA-3B; Provisional
    COG1196
    Location:305 → 553
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:104 → 390
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  3. XM_036125552.1 → XP_035981445.1  intraflagellar transport protein 74 homolog isoform X1

    UniProtKB/TrEMBL
    A0A3Q2P6M3
    Conserved Domains (3) summary
    PHA03378
    Location:2 → 91
    PHA03378; EBNA-3B; Provisional
    COG1196
    Location:305 → 553
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:104 → 390
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

RNA

  1. XR_004927493.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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